Indonesia, home to the largest tropical rainforest in Southeast Asia and over 17,500 islands, is a country packed with biodiversity and endangered species. However, scientists studying the region’s species and ecosystems are getting banned from Indonesia, and conservation plans are being blocked. A team of conservation researchers with long-term experience in Indonesia discuss scientific suppression and other research challenges they have witnessed while working in the region. They offer suggestions for how to promote nature conservation, protect data transparency, and share research with the public in this and other regions of the world.